Isolation and cloning of an inulinase gene from an endophytic bacteria

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date 2024-09-24 16:49
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spelling 7439 https://intelek.unisza.edu.my/intelek/pages/view.php?ref=7439 https://intelek.unisza.edu.my/intelek/pages/search.php?search=!collection407072 Restricted Document Article Journal Deflate/Inflate 900 1440x900 1440 image/png 2024-09-24 16:49 2887-01-FH02-FPBSM-14-00430.png UniSZA Private Access Isolation and cloning of an inulinase gene from an endophytic bacteria Advances in Environmental Biology In this study, an endophytic bacterium was isolated from Black Solenosternon scutellarioides plant and was named as AS. A simple and rapid method is described for the detection of inulinase-producing bacterial endophyte on agar plate using Remazol Brilliant Blue-inufin as substrate. The inulinase activity of AS bacteria isolate was detected by clear zone surroundings the colonies. The inulinase gene obtained from AS bacterium was amplified by the polymerase chain reaction. Degenerate primers were used specifically designed to pick up the inulinase gene. pGEM-T Easy and E. coli JM109 were used as cloning vector and host strain. respectively. The results showed that the partial sequence of inulinase gene consisted of 449bp. From the comparison with partial amino acid sequence of inulinase. the deduced polypeptide showed high sequence similarity to Paenibaccillus polymyxa and Geobacillus stearothermophilus exo-inulinases. 4 3 392-396
spellingShingle Isolation and cloning of an inulinase gene from an endophytic bacteria
summary In this study, an endophytic bacterium was isolated from Black Solenosternon scutellarioides plant and was named as AS. A simple and rapid method is described for the detection of inulinase-producing bacterial endophyte on agar plate using Remazol Brilliant Blue-inufin as substrate. The inulinase activity of AS bacteria isolate was detected by clear zone surroundings the colonies. The inulinase gene obtained from AS bacterium was amplified by the polymerase chain reaction. Degenerate primers were used specifically designed to pick up the inulinase gene. pGEM-T Easy and E. coli JM109 were used as cloning vector and host strain. respectively. The results showed that the partial sequence of inulinase gene consisted of 449bp. From the comparison with partial amino acid sequence of inulinase. the deduced polypeptide showed high sequence similarity to Paenibaccillus polymyxa and Geobacillus stearothermophilus exo-inulinases.
title Isolation and cloning of an inulinase gene from an endophytic bacteria
title_full Isolation and cloning of an inulinase gene from an endophytic bacteria
title_fullStr Isolation and cloning of an inulinase gene from an endophytic bacteria
title_full_unstemmed Isolation and cloning of an inulinase gene from an endophytic bacteria
title_short Isolation and cloning of an inulinase gene from an endophytic bacteria
title_sort isolation and cloning of an inulinase gene from an endophytic bacteria