The first Malay database toward the ethnic-specific target molecular variation

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internalnotes 1. Ruangrit U, Srikummool M, Assawamakin A, Ngamphiw C, Chuechote S, Thaiprasarnsup V, et al. Thailand mutation and variation database (ThaiMUT). Hum Mutat. 2008;29:68–75. 2. Tan EC, Loh M, Chuon D, Lim YP. Singapore Human Mutation/Polymorphism Database: a country-specific database for mutations and polymorphisms in inherited disorders and candidate gene association studies. Hum Mutat. 2006;27:232–5. 3. Kleanthous M, Patsalis PC, Drousiotou A, Motazacker M, Christodoulou K, Cariolou M, et al. The Cypriot and Iranian National Mutation Frequency Database. Hum Mutat. 2006;27:589–99. 4. Teebi AS, Teebi SA, Porter CJ, Cuticchia AJ. Arab genetic disease database (AGDDB): a population-specific clinical and mutation database. Hum Mutat. 2010;19:615–21. 5. Meigs JB, Soranzo N. Response to comment on: Soranzo et al. common variants at 10 genomic loci influence hemoglobin A1C levels via glycemic and nonglycemic pathways. Diabetes. 2010;59:3229–39. 6. Tabara Y, Kohara K, Kita Y, Hirawa N, Katsuya T, Ohkubo T. Common variants in the ATP2B1 gene are associated with susceptibility to hypertension: the Japanese Millennium Genome Project. Hypertension. 2010;56:973–80. 7. Anney R, Klei L, Pinto D, Regan R, Conroy J, Magalhaes TR, et al. A genome-wide scan for common alleles affecting risk for autism. Hum Mol Genet. 2010;19:4072–82. 8. Abdulla MA, Ahmed I, Assawamakin A, Bhak J, Brahmachari SK, Calacal GC, et al. Mapping human genetic diversity in Asia. Science. 2009;326:1541–5. 9. Department of Statistics. Malaysia Year Book of Statistics. 2007. 10. Ministry of Health, Malaysia. Health Facts 2009. The most common causes of death in Malaysia. Available at http://www.moh.gov.my/images/gallery/ stats/heal_fact/healthfact_L_2009.pdf. 11. Ainoon O, Cheong SK. Thalassaemia in Malaysia: a strategy for prevention. Malays J Pathol. 1994;16:23–7. 12. Thong MK, Bazlin RI, Wong KT. Diagnosis and management of Duchenne muscular dystrophy in a developing country over a 10-year period. Dev Med Child Neurol. 2005;47:474–7. 13. Goh KJ, Tian S, Shahrizaila N, Ng CW, Tan CT. Survival and prognostic factors of motor neuron disease in a multi-ethnic Asian population. Amyotroph Lateral Scler. 2011;12:124–9. 14. Sinniah D, Narasimha G, Prathap K. Advanced retinoblastoma in Malaysian children. Acta Ophthalmol. 1980;58:819–24. 15. Amini F, Ismail E, Zilfalil BA. Prevalence and molecular study of G6PD deficiency in Malaysian Orang Asli. Intern Med J. 2011;41:351–3. 16. Boo NY, Arshad AR. A study of cleft lip and palate in neonates born in a large Malaysian maternity hospital over a 2-year period. Singapore Med J. 1990;31:59–62. 17. AlAama J, Smith TD, Lo A, Howard H, Kline AA, Lange M, et al. Initiating a human variome project country node. Hum Mutat. 2011;32:501–6.
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spelling 11905 https://intelek.unisza.edu.my/intelek/pages/view.php?ref=11905 https://intelek.unisza.edu.my/intelek/pages/search.php?search=!collection407072 Restricted Document Article Journal application/pdf 7 Adobe Acrobat Pro DC 20 Paper Capture Plug-in with ClearScan 1.6 Adobe Acrobat 20.6 2024-08-26 17:43:41 6206-01-FH02-FP-15-03328.pdf UniSZA Private Access The first Malay database toward the ethnic-specific target molecular variation BMC Research Notes Background The Malaysian Node of the Human Variome Project (MyHVP) is one of the eighteen official Human Variome Project (HVP) country-specific nodes. Since its inception in 9th October 2010, MyHVP has attracted the significant number of Malaysian clinicians and researchers to participate and contribute their data to this project. MyHVP also act as the center of coordination for genotypic and phenotypic variation studies of the Malaysian population. A specialized database was developed to store and manage the data based on genetic variations which also associated with health and disease of Malaysian ethnic groups. This ethnic-specific database is called the Malaysian Node of the Human Variome Project database (MyHVPDb). Findings Currently, MyHVPDb provides only information about the genetic variations and mutations found in the Malays. In the near future, it will expand for the other Malaysian ethnics as well. The data sets are specified based on diseases or genetic mutation types which have three main subcategories: Single Nucleotide Polymorphism (SNP), Copy Number Variation (CNV) followed by the mutations which code for the common diseases among Malaysians. MyHVPDb has been open to the local researchers, academicians and students through the registration at the portal of MyHVP (http://hvpmalaysia.kk.usm.my/mhgvc/index.php?id=register). Conclusions This database would be useful for clinicians and researchers who are interested in doing a study on genomics population and genetic diseases in order to obtain up-to-date and accurate information regarding the population-specific variations and also useful for those in countries with similar ethnic background. 8 1 1. Ruangrit U, Srikummool M, Assawamakin A, Ngamphiw C, Chuechote S, Thaiprasarnsup V, et al. Thailand mutation and variation database (ThaiMUT). Hum Mutat. 2008;29:68–75. 2. Tan EC, Loh M, Chuon D, Lim YP. Singapore Human Mutation/Polymorphism Database: a country-specific database for mutations and polymorphisms in inherited disorders and candidate gene association studies. Hum Mutat. 2006;27:232–5. 3. Kleanthous M, Patsalis PC, Drousiotou A, Motazacker M, Christodoulou K, Cariolou M, et al. The Cypriot and Iranian National Mutation Frequency Database. Hum Mutat. 2006;27:589–99. 4. Teebi AS, Teebi SA, Porter CJ, Cuticchia AJ. Arab genetic disease database (AGDDB): a population-specific clinical and mutation database. Hum Mutat. 2010;19:615–21. 5. Meigs JB, Soranzo N. Response to comment on: Soranzo et al. common variants at 10 genomic loci influence hemoglobin A1C levels via glycemic and nonglycemic pathways. Diabetes. 2010;59:3229–39. 6. Tabara Y, Kohara K, Kita Y, Hirawa N, Katsuya T, Ohkubo T. Common variants in the ATP2B1 gene are associated with susceptibility to hypertension: the Japanese Millennium Genome Project. Hypertension. 2010;56:973–80. 7. Anney R, Klei L, Pinto D, Regan R, Conroy J, Magalhaes TR, et al. A genome-wide scan for common alleles affecting risk for autism. Hum Mol Genet. 2010;19:4072–82. 8. Abdulla MA, Ahmed I, Assawamakin A, Bhak J, Brahmachari SK, Calacal GC, et al. Mapping human genetic diversity in Asia. Science. 2009;326:1541–5. 9. Department of Statistics. Malaysia Year Book of Statistics. 2007. 10. Ministry of Health, Malaysia. Health Facts 2009. The most common causes of death in Malaysia. Available at http://www.moh.gov.my/images/gallery/ stats/heal_fact/healthfact_L_2009.pdf. 11. Ainoon O, Cheong SK. Thalassaemia in Malaysia: a strategy for prevention. Malays J Pathol. 1994;16:23–7. 12. Thong MK, Bazlin RI, Wong KT. Diagnosis and management of Duchenne muscular dystrophy in a developing country over a 10-year period. Dev Med Child Neurol. 2005;47:474–7. 13. Goh KJ, Tian S, Shahrizaila N, Ng CW, Tan CT. Survival and prognostic factors of motor neuron disease in a multi-ethnic Asian population. Amyotroph Lateral Scler. 2011;12:124–9. 14. Sinniah D, Narasimha G, Prathap K. Advanced retinoblastoma in Malaysian children. Acta Ophthalmol. 1980;58:819–24. 15. Amini F, Ismail E, Zilfalil BA. Prevalence and molecular study of G6PD deficiency in Malaysian Orang Asli. Intern Med J. 2011;41:351–3. 16. Boo NY, Arshad AR. A study of cleft lip and palate in neonates born in a large Malaysian maternity hospital over a 2-year period. Singapore Med J. 1990;31:59–62. 17. AlAama J, Smith TD, Lo A, Howard H, Kline AA, Lange M, et al. Initiating a human variome project country node. Hum Mutat. 2011;32:501–6.
spellingShingle The first Malay database toward the ethnic-specific target molecular variation
summary Background The Malaysian Node of the Human Variome Project (MyHVP) is one of the eighteen official Human Variome Project (HVP) country-specific nodes. Since its inception in 9th October 2010, MyHVP has attracted the significant number of Malaysian clinicians and researchers to participate and contribute their data to this project. MyHVP also act as the center of coordination for genotypic and phenotypic variation studies of the Malaysian population. A specialized database was developed to store and manage the data based on genetic variations which also associated with health and disease of Malaysian ethnic groups. This ethnic-specific database is called the Malaysian Node of the Human Variome Project database (MyHVPDb). Findings Currently, MyHVPDb provides only information about the genetic variations and mutations found in the Malays. In the near future, it will expand for the other Malaysian ethnics as well. The data sets are specified based on diseases or genetic mutation types which have three main subcategories: Single Nucleotide Polymorphism (SNP), Copy Number Variation (CNV) followed by the mutations which code for the common diseases among Malaysians. MyHVPDb has been open to the local researchers, academicians and students through the registration at the portal of MyHVP (http://hvpmalaysia.kk.usm.my/mhgvc/index.php?id=register). Conclusions This database would be useful for clinicians and researchers who are interested in doing a study on genomics population and genetic diseases in order to obtain up-to-date and accurate information regarding the population-specific variations and also useful for those in countries with similar ethnic background.
title The first Malay database toward the ethnic-specific target molecular variation
title_full The first Malay database toward the ethnic-specific target molecular variation
title_fullStr The first Malay database toward the ethnic-specific target molecular variation
title_full_unstemmed The first Malay database toward the ethnic-specific target molecular variation
title_short The first Malay database toward the ethnic-specific target molecular variation
title_sort first malay database toward the ethnic-specific target molecular variation