An interactive tool for visualization of relationships between gene expression profiles

by Ruzanov, Peter, Jones, Steven JM
Published 2006

Structural characterization of genomes by large scale sequence-structure threading

by Cherkasov, Artem, Jones, Steven JM
Published 2004

An approach to large scale identification of non-obvious structural similarities between proteins

by Cherkasov, Artem, Jones, Steven JM
Published 2004

A knowledge discovery object model API for Java

by Zuyderduyn, Scott D, Jones, Steven JM
Published 2003

Drug repositioning for personalized medicine

by Li, Yvonne Y, Jones, Steven JM
Published 2012

Structural characterization of genomes by large scale sequence-structure threading: application of reliability analysis in structural genomics

by Cherkasov, Artem, Ho Sui, Shannan J, Brunham, Robert C, Jones, Steven JM
Published 2004

Identifying cancer mutation targets across thousands of samples: MuteProc, a high throughput mutation analysis pipeline

by Hadj Khodabakhshi, Alireza, Fejes, Anthony P, Birol, Inanc, Jones, Steven JM
Published 2013

VisRseq: R-based visual framework for analysis of sequencing data

by Younesy, Hamid, Möller, Torsten, Lorincz, Matthew C, Karimi, Mohammad M, Jones, Steven JM
Published 2015

Distinct roles of KAP1, HP1 and G9a/GLP in silencing of the two-cell-specific retrotransposon MERVL in mouse ES cells

by Maksakova, Irina A, Thompson, Peter J, Goyal, Preeti, Jones, Steven JM, Singh, Prim B, Karimi, Mohammad M, Lorincz, Matthew C
Published 2013

Novel expressed sequences identified in a model of androgen independent prostate cancer

by Quayle, Steven N, Hare, Heidi, Delaney, Allen D, Hirst, Martin, Hwang, Dorothy, Schein, Jacqueline E, Jones, Steven JM, Marra, Marco A, Sadar, Marianne D
Published 2007

A systematic screen for genes expressed in definitive endoderm by Serial Analysis of Gene Expression (SAGE)

by Hou, Juan, Charters, Anita M, Lee, Sam C, Zhao, Yongjun, Wu, Mona K, Jones, Steven JM, Marra, Marco A, Hoodless, Pamela A
Published 2007

Genome sequences of six Phytophthora species threatening forest ecosystems

by Feau, Nicolas, Taylor, Greg, Dale, Angela L., Dhillon, Braham, Bilodeau, Guillaume J., Birol, Inanç, Jones, Steven J.M., Hamelin, Richard C.
Published 2016

Putative BRAF activating fusion in a medullary thyroid cancer

by Kasaian, Katayoon, Wiseman, Sam M., Walker, Blair A., Schein, Jacqueline E., Hirst, Martin, Moore, Richard A., Mungall, Andrew J., Marra, Marco A., Jones, Steven J.M.
Published 2016

The genomic and transcriptomic landscape of anaplastic thyroid cancer: implications for therapy

by Kasaian, Katayoon, Wiseman, Sam M., Walker, Blair A., Schein, Jacqueline E., Zhao, Yongjun, Hirst, Martin, Moore, Richard A., Mungall, Andrew J., Marra, Marco A., Jones, Steven JM
Published 2015

A Pan-Cancer Analysis of Alternative Splicing Events Reveals Novel Tumor-Associated Splice Variants of Matriptase

by Dargahi, Daryanaz, Swayze, Richard D, Yee, Leanna, Bergqvist, Peter J, Hedberg, Bradley J, Heravi-Moussavi, Alireza, Dullaghan, Edie M, Dercho, Ryan, An, Jianghong, Babcook, John S, Jones, Steven JM
Published 2014

Retrospective review using targeted deep sequencing reveals mutational differences between gastroesophageal junction and gastric carcinomas

by Li-Chang, Hector H, Kasaian, Katayoon, Ng, Ying, Lum, Amy, Kong, Esther, Lim, Howard, Jones, Steven JM, Huntsman, David G, Schaeffer, David F, Yip, Stephen
Published 2015

Gene discovery for the bark beetle-vectored fungal tree pathogen Grosmannia clavigera

by Hesse-Orce, Uljana, DiGuistini, Scott, Keeling, Christopher I, Wang, Ye, Li, Maria, Henderson, Hannah, Docking, T Roderick, Liao, Nancy Y, Robertson, Gordon, Holt, Robert A, Jones, Steven JM, Bohlmann, Jörg, Breuil, Colette
Published 2010

Updated genome assembly and annotation of Paenibacillus larvae, the agent of American foulbrood disease of honey bees

by Chan, Queenie WT, Cornman, R Scott, Birol, Inanc, Liao, Nancy Y, Chan, Simon K, Docking, T Roderick, Jackman, Shaun D, Taylor, Greg A, Jones, Steven JM, de Graaf, Dirk C, Evans, Jay D, Foster, Leonard J
Published 2011

Analysis of the prostate cancer cell line LNCaP transcriptome using a sequencing-by-synthesis approach

by Bainbridge, Matthew N, Warren, René L, Hirst, Martin, Romanuik, Tammy, Zeng, Thomas, Go, Anne, Delaney, Allen, Griffith, Malachi, Hickenbotham, Matthew, Magrini, Vincent, Mardis, Elaine R, Sadar, Marianne D, Siddiqui, Asim S, Marra, Marco A, Jones, Steven JM
Published 2006

Genetic basis of transcriptome differences between the founder strains of the rat HXB/BXH recombinant inbred panel

by Simonis, Marieke, Atanur, Santosh S, Linsen, Sam, Guryev, Victor, Ruzius, Frans-Paul, Game, Laurence, Lansu, Nico, de Bruijn, Ewart, van Heesch, Sebastiaan, Jones, Steven JM, Pravenec, Michal, Aitman, Tim J, Cuppen, Edwin
Published 2012