oPOSSUM: integrated tools for analysis of regulatory motif over-representation

by Ho Sui, Shannan J., Fulton, Debra L., Arenillas, David J., Kwon, Andrew T., Wasserman, Wyeth W.
Published 2007

Structural characterization of genomes by large scale sequence-structure threading: application of reliability analysis in structural genomics

by Cherkasov, Artem, Ho Sui, Shannan J, Brunham, Robert C, Jones, Steven JM
Published 2004

oPOSSUM: identification of over-represented transcription factor binding sites in co-expressed genes

by Ho Sui, Shannan J., Mortimer, James R., Arenillas, David J., Brumm, Jochen, Walsh, Christopher J., Kennedy, Brian P., Wasserman, Wyeth W.
Published 2005

Pathprinting: An integrative approach to understand the functional basis of disease

by Altschuler, Gabriel M, Hofmann, Oliver, Kalatskaya, Irina, Payne, Rebecca, Ho Sui, Shannan J, Saxena, Uma, Krivtsov, Andrei V, Armstrong, Scott A, Cai, Tianxi, Stein, Lincoln, Hide, Winston A
Published 2013

The Stem Cell Discovery Engine: an integrated repository and analysis system for cancer stem cell comparisons

by Ho Sui, Shannan J., Begley, Kimberly, Reilly, Dorothy, Chapman, Brad, McGovern, Ray, Rocca-Sera, Philippe, Maguire, Eamonn, Altschuler, Gabriel M., Hansen, Terah A. A., Sompallae, Ramakrishna, Krivtsov, Andrei, Shivdasani, Ramesh A., Armstrong, Scott A., Culhane, Aedín C., Correll, Mick, Sansone, Susanna-Assunta, Hofmann, Oliver, Hide, Winston
Published 2012