An automated proteomic data analysis workflow for mass spectrometry

by Pendarvis, Ken, Kumar, Ranjit, Burgess, Shane C, Nanduri, Bindu
Published 2009

Experimental-confirmation and functional-annotation of predicted proteins in the chicken genome

by Buza, Teresia J, McCarthy, Fiona M, Burgess, Shane C
Published 2007

TAAPP: Tiling Array Analysis Pipeline for Prokaryotes

by Kumar, Ranjit, Burgess, Shane C., Lawrence, Mark L., Nanduri, Bindu
Published 2011

Comprehensive proteomic analysis of bovine spermatozoa of varying fertility rates and identification of biomarkers associated with fertility

by Peddinti, Divyaswetha, Nanduri, Bindu, Kaya, Abdullah, Feugang, Jean M, Burgess, Shane C, Memili, Erdogan
Published 2008

Gene Ontology annotation quality analysis in model eukaryotes

by Buza, Teresia J., McCarthy, Fiona M., Wang, Nan, Bridges, Susan M., Burgess, Shane C.
Published 2008

Prediction of Cell Penetrating Peptides by Support Vector Machines

by Sanders, William S., Johnston, C. Ian, Bridges, Susan M., Burgess, Shane C., Willeford, Kenneth O.
Published 2011

Facilitating functional annotation of chicken microarray data

by Buza, Teresia J, Kumar, Ranjit, Gresham, Cathy R, Burgess, Shane C, McCarthy, Fiona M
Published 2009

Structural and functional-annotation of an equine whole genome oligoarray

by Bright, Lauren A, Burgess, Shane C, Chowdhary, Bhanu, Swiderski, Cyprianna E, McCarthy, Fiona M
Published 2009

RNA-Seq Based Transcriptional Map of Bovine Respiratory Disease Pathogen “Histophilus somni 2336”

by Kumar, Ranjit, Lawrence, Mark L., Watt, James, Cooksey, Amanda M., Burgess, Shane C., Nanduri, Bindu
Published 2012

Complete genome and comparative analysis of the chemolithoautotrophic bacterium Oligotropha carboxidovorans OM5

by Paul, Debarati, Bridges, Susan M, Burgess, Shane C, Dandass, Yoginder S, Lawrence, Mark L
Published 2010

Prediction of peptides observable by mass spectrometry applied at the experimental set level

by Sanders, William S, Bridges, Susan M, McCarthy, Fiona M, Nanduri, Bindu, Burgess, Shane C
Published 2007

ProtQuant: a tool for the label-free quantification of MudPIT proteomics data

by Bridges, Susan M, Magee, G Bryce, Wang, Nan, Williams, W Paul, Burgess, Shane C, Nanduri, Bindu
Published 2007

RNA-Seq-based transcriptional map of the bovine respiratory disease pathogen Histophilus somni 2336

by Kumar, Ranjit, Lawrence, Mark L, Watt, James, Cooksey, Amanda, Burgess, Shane C, Nanduri, Bindu
Published 2011

Transcriptome profile of a bovine respiratory disease pathogen: Mannheimia haemolytica PHL213

by Reddy, Joseph S, Kumar, Ranjit, Watt, James M, Lawrence, Mark L, Burgess, Shane C, Nanduri, Bindu
Published 2012

Gene Profiling of Aortic Valve Interstitial Cells under Elevated Pressure Conditions: Modulation of Inflammatory Gene Networks

by Warnock, James N., Nanduri, Bindu, Pregonero Gamez, Carol A., Tang, Juliet, Koback, Daniel, Muir, William M., Burgess, Shane C.
Published 2011

Transcriptome-Based Differentiation of Closely-Related Miscanthus Lines

by Chouvarine, Philippe, Cooksey, Amanda M., McCarthy, Fiona M., Ray, David A., Baldwin, Brian S., Burgess, Shane C., Peterson, Daniel G.
Published 2012

AgBase: a unified resource for functional analysis in agriculture

by McCarthy, Fiona M., Bridges, Susan M., Wang, Nan, Magee, G. Bryce, Williams, W. Paul, Luthe, Dawn S., Burgess, Shane C.
Published 2007

Ultrasonic Incisions Produce Less Inflammatory Mediator Response during Early Healing than Electrosurgical Incisions

by Nanduri, Bindu, Pendarvis, Ken, Shack, Leslie A., Kumar, Ranjit, Clymer, Jeffrey W., Korvick, Donna L., Burgess, Shane C.
Published 2013

Genome Sequence of the Oleaginous Yeast Rhodotorula glutinis ATCC 204091

by Paul, Debarati, Magbanua, Zenaida, Arick, Mark, French, Todd, Bridges, Susan M., Burgess, Shane C., Lawrence, Mark L.
Published 2014

Proteogenomic mapping of Mycoplasma hyopneumoniae virulent strain 232

by Pendarvis, Ken, Padula, Matthew P, Tacchi, Jessica L, Petersen, Andrew C, Djordjevic, Steven P, Burgess, Shane C, Minion, F Chris
Published 2014